Carideicomes alvinocaridis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Carideicomes

Description

Carideicomes alvinocaridis is a species classified under the domain of bacteria, characterized by having a single replicon. Its genomic information is accessible through the accession number SRJI00000000.2. This trait of possessing one replicon suggests a streamlined genomic organization, which may influence various biological processes, including replication and gene expression. The single replicon characteristic could imply a certain efficiency in genomic replication that might be advantageous in specific environments or ecological niches. The organism's biological and ecological roles are not detailed in the provided data, but understanding its genomic structure can provide insights into its adaptability and survival strategies in various habitats. In summary, Carideicomes alvinocaridis is defined by its single replicon and is cataloged under the accession SRJI00000000.2. While specific ecological interactions or biological functions are not provided, the trait of having one replicon may be indicative of its evolutionary adaptations. Further research could elucidate its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusCarideicomes
SpeciesCarideicomes alvinocaridis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Carideicomes alvinocaridis strain SCR17 scaffold_1481, whole

Gene Summary

Adenine Count

843852 bp

Thymine Count

843836 bp

Guanine Count

1764774 bp

Cytosine Count

1770442 bp

Genome Length

5228280 bp

Protein-coding Genes

5304 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uracil phosphoribosyltransferaseE0K89_007470Not AvailablePositive1583998 - 158463023031.3
helix-turn-helix domain-containing proteinE0K89_007480Not AvailablePositive1585313 - 158593623228.6
trna 2-thiouridine(34) synthase mnmaE0K89_007485Not AvailableNegative1585991 - 158713341522.4
duf1153 domain-containing proteinE0K89_007490Not AvailablePositive1587263 - 158757111602.8
response regulatorE0K89_007495Not AvailablePositive1587649 - 158836526791.3
nad-dependent dna ligase ligaE0K89_007500Not AvailablePositive1588705 - 159112588387.1
atp-dependent dna helicase recgE0K89_007505Not AvailablePositive1591122 - 159321275425.2
iron-sulfur cluster assembly scaffold proteinE0K89_007510Not AvailableNegative1593714 - 159416015497.6
phosphoribosyl-amp cyclohydrolaseE0K89_007515Not AvailablePositive1594228 - 159458713128.6
atp-dependent dna ligaseE0K89_007520Not AvailableNegative1594723 - 159631560787.2

Displaying genes 1491 – 1500 of 5377 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.