Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Saccharopolyspora
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Saccharopolyspora |
| Species | Saccharopolyspora karakumensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1009023 bp
Thymine Count
1009596 bp
Guanine Count
2330188 bp
Cytosine Count
2321906 bp
Genome Length
6670713 bp
Protein-coding Genes
5983 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1202_22135 | Not Available | Negative | 4701263 - 4701646 | 14034.0 |
| hypothetical protein | E1202_22140 | Not Available | Negative | 4701924 - 4702211 | 10536.3 |
| hypothetical protein | E1202_22145 | Not Available | Negative | 4702462 - 4702773 | 11025.8 |
| type vii secretion protein eccb | E1202_22150 | Not Available | Negative | 4702842 - 4704266 | 47969.4 |
| type vii secretion integral membrane protein eccd | E1202_22155 | Not Available | Negative | 4704540 - 4705961 | 48633.1 |
| type vii secretion protein eccca | E1202_22160 | Not Available | Positive | 4706257 - 4710180 | 141948.0 |
| type vii secretion-associated serine protease mycosin | E1202_22165 | Not Available | Positive | 4710177 - 4711331 | 37855.4 |
| luxr family transcriptional regulator | E1202_22170 | Not Available | Positive | 4711477 - 4714320 | 101425.0 |
| sigma-70 family rna polymerase sigma factor | E1202_22175 | Not Available | Positive | 4714725 - 4715471 | 27955.0 |
| laci family transcriptional regulator | E1202_22180 | Not Available | Negative | 4715440 - 4716435 | 35445.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
