Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Saccharopolyspora
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Saccharopolyspora |
| Species | Saccharopolyspora karakumensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1009023 bp
Thymine Count
1009596 bp
Guanine Count
2330188 bp
Cytosine Count
2321906 bp
Genome Length
6670713 bp
Protein-coding Genes
5983 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | E1202_20855 | Not Available | Negative | 4412463 - 4414352 | 68095.2 |
| sugar isomerase | E1202_20860 | Not Available | Negative | 4414465 - 4415070 | 21854.8 |
| merr family transcriptional regulator | E1202_20865 | Not Available | Negative | 4415355 - 4416077 | 26299.2 |
| s9 family peptidase | E1202_20870 | Not Available | Positive | 4416234 - 4418108 | 68287.4 |
| duf3159 domain-containing protein | E1202_20875 | Not Available | Positive | 4418105 - 4418749 | 22472.0 |
| hypothetical protein | E1202_20880 | Not Available | Negative | 4419296 - 4419562 | 10412.5 |
| hypothetical protein | E1202_20885 | Not Available | Negative | 4419562 - 4419873 | 10305.4 |
| asp23/gls24 family envelope stress response protein | E1202_20890 | Not Available | Negative | 4419918 - 4420421 | 17058.8 |
| hypothetical protein | E1202_20895 | Not Available | Negative | 4420560 - 4421123 | 19968.8 |
| sigma-70 family rna polymerase sigma factor | E1202_20900 | Not Available | Negative | 4421116 - 4421682 | 21259.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
