Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Saccharopolyspora
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Saccharopolyspora |
| Species | Saccharopolyspora karakumensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1009023 bp
Thymine Count
1009596 bp
Guanine Count
2330188 bp
Cytosine Count
2321906 bp
Genome Length
6670713 bp
Protein-coding Genes
5983 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1202_20645 | Not Available | Negative | 4374281 - 4374976 | 25014.9 |
| mfs transporter | E1202_20650 | Not Available | Negative | 4375189 - 4376478 | 45036.4 |
| helix-turn-helix domain-containing protein | E1202_20655 | Not Available | Positive | 4376541 - 4377506 | 35058.8 |
| duf4232 domain-containing protein | E1202_20660 | Not Available | Positive | 4377680 - 4378336 | 22321.9 |
| beta-xylosidase | E1202_20665 | Not Available | Negative | 4378374 - 4379660 | 44762.2 |
| type ii 3-dehydroquinate dehydratase | E1202_20670 | Not Available | Negative | 4379822 - 4380256 | 15585.5 |
| 3-dehydroquinate synthase | E1202_20675 | Not Available | Negative | 4380253 - 4381362 | 39265.2 |
| shikimate kinase | E1202_20680 | Not Available | Negative | 4381508 - 4382029 | 18159.8 |
| chorismate synthase | E1202_20685 | Not Available | Negative | 4382026 - 4383231 | 42936.3 |
| prepilin peptidase | E1202_20690 | Not Available | Negative | 4383280 - 4383861 | 19462.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
