Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Saccharopolyspora
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Saccharopolyspora |
| Species | Saccharopolyspora karakumensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1009023 bp
Thymine Count
1009596 bp
Guanine Count
2330188 bp
Cytosine Count
2321906 bp
Genome Length
6670713 bp
Protein-coding Genes
5983 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1202_19115 | Not Available | Positive | 4053597 - 4053932 | 10885.7 |
| hypothetical protein | E1202_19120 | Not Available | Positive | 4054043 - 4054477 | 15864.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | E1202_19125 | Not Available | Positive | 4054531 - 4055517 | 33643.9 |
| chad domain-containing protein | E1202_19130 | Not Available | Positive | 4055691 - 4056614 | 34006.8 |
| succinyldiaminopimelate transaminase | E1202_19135 | Not Available | Negative | 4056639 - 4057754 | 38938.4 |
| ferredoxin family protein | E1202_19140 | Not Available | Negative | 4057751 - 4058071 | 11523.5 |
| hypothetical protein | E1202_19145 | Not Available | Negative | 4058212 - 4058970 | 27619.6 |
| hypothetical protein | E1202_19150 | Not Available | Negative | 4059069 - 4059416 | 12034.4 |
| n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylase | E1202_19155 | Not Available | Negative | 4059428 - 4060339 | 32415.0 |
| abc transporter family substrate-binding protein | E1202_19160 | Not Available | Negative | 4060590 - 4062341 | 61620.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
