Saccharopolyspora karakumensis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharopolyspora

Description

Saccharopolyspora karakumensis is a Gram-positive bacterium characterized by a single replicon. This organism is classified within the genus Saccharopolyspora, which is known for its role in various ecological niches, particularly in soil environments. The significance of Saccharopolyspora species often lies in their potential applications in biotechnology, including antibiotic production and bioremediation processes. The accession number for Saccharopolyspora karakumensis is SMLA00000000.1, which provides a reference point for genomic studies and comparative analysis with related species. As a member of the Actinobacteria phylum, this bacterium may contribute to the decomposition of organic materials and the cycling of nutrients in its habitat. From a biological perspective, the Gram-positive nature of Saccharopolyspora karakumensis suggests a thicker peptidoglycan layer in its cell wall, which can provide advantages in resisting environmental stresses. This trait is particularly important for survival in diverse and potentially harsh conditions. Overall, the characteristics of Saccharopolyspora karakumensis highlight its potential ecological roles, particularly in nutrient cycling and soil health, which are critical for maintaining ecosystem balance. Further research may elucidate its specific contributions to these processes and its potential applications in environmental and industrial microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharopolyspora
SpeciesSaccharopolyspora karakumensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharopolyspora karakumensis strain 5K548

Gene Summary

Adenine Count

1009023 bp

Thymine Count

1009596 bp

Guanine Count

2330188 bp

Cytosine Count

2321906 bp

Genome Length

6670713 bp

Protein-coding Genes

5983 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uridine kinaseE1202_13835Not AvailableNegative2908652 - 290929323538.8
ld-carboxypeptidaseE1202_13840Not AvailableNegative2909330 - 291026233160.2
duf3090 domain-containing proteinE1202_13845Not AvailablePositive2910483 - 291104920845.5
sco1664 family proteinE1202_13850Not AvailablePositive2911055 - 291185529481.8
class a beta-lactamase-related serine hydrolaseE1202_13855Not AvailableNegative2912051 - 291329245311.9
magnesium chelataseE1202_13860Not AvailablePositive2913413 - 291481350523.2
vwa domain-containing proteinE1202_13865Not AvailablePositive2914813 - 291676572626.7
glycine betaine abc transporter substrate-binding proteinE1202_13870Not AvailableNegative2917204 - 291809732259.2
proline/glycine betaine abc transporter permeaseE1202_13875Not AvailableNegative2918127 - 291901431292.2
atp-binding cassette domain-containing proteinE1202_13880Not AvailableNegative2919007 - 292003537042.5

Displaying genes 2681 – 2690 of 6041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.