Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Saccharopolyspora
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Saccharopolyspora |
| Species | Saccharopolyspora karakumensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1009023 bp
Thymine Count
1009596 bp
Guanine Count
2330188 bp
Cytosine Count
2321906 bp
Genome Length
6670713 bp
Protein-coding Genes
5983 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase subunit alpha | E1202_12285 | Not Available | Positive | 2572201 - 2572761 | 20134.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | E1202_12290 | Not Available | Positive | 2572800 - 2574116 | 45820.7 |
| 3-oxoadipate enol-lactonase | E1202_12295 | Not Available | Positive | 2574113 - 2574871 | 26411.5 |
| 4-carboxymuconolactone decarboxylase | E1202_12300 | Not Available | Positive | 2574868 - 2575251 | 14147.7 |
| iclr family transcriptional regulator | E1202_12305 | Not Available | Positive | 2575287 - 2576087 | 29032.7 |
| fadr family transcriptional regulator | E1202_12310 | Not Available | Negative | 2576194 - 2576955 | 28173.2 |
| (fe-s)-binding protein | E1202_12315 | Not Available | Positive | 2577107 - 2577841 | 26184.5 |
| iron-sulfur cluster-binding protein | E1202_12320 | Not Available | Positive | 2577859 - 2579286 | 51847.6 |
| lactate utilization protein c | E1202_12325 | Not Available | Positive | 2579283 - 2579918 | 21965.8 |
| duf3616 domain-containing protein | E1202_12330 | Not Available | Negative | 2579924 - 2580955 | 36901.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
