Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omptin family outer membrane protease | EXZ48_25785 | Not Available | Positive | 5462330 - 5463298 | 35135.1 |
| hypothetical protein | EXZ48_25790 | Not Available | Positive | 5463477 - 5464040 | 20450.1 |
| duf1403 family protein | EXZ48_25795 | Not Available | Positive | 5464291 - 5464581 | 10040.4 |
| duf1403 family protein | EXZ48_25800 | Not Available | Positive | 5464606 - 5464848 | 8591.3 |
| hypothetical protein | EXZ48_25815 | Not Available | Negative | 5465924 - 5466421 | 18232.8 |
| tetr/acrr family transcriptional regulator | EXZ48_25820 | Not Available | Positive | 5466660 - 5467301 | 23032.7 |
| nyn domain-containing protein | EXZ48_25825 | Not Available | Positive | 5467540 - 5468301 | 27513.7 |
| dna-binding transcriptional regulator | EXZ48_25830 | Not Available | Negative | 5468471 - 5468794 | 11842.3 |
| type ii toxin-antitoxin system rele/pare family toxin | EXZ48_25835 | Not Available | Negative | 5468784 - 5469143 | 13286.9 |
| hypothetical protein | EXZ48_25920 | Not Available | Negative | 5480512 - 5481441 | 33273.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
