Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | EXZ48_25585 | Not Available | Positive | 5410674 - 5411612 | 32320.0 |
| sugar phosphate isomerase/epimerase | EXZ48_25590 | Not Available | Positive | 5411698 - 5412594 | 32430.6 |
| abc transporter permease | EXZ48_25595 | Not Available | Negative | 5412600 - 5413457 | 31380.2 |
| abc transporter permease | EXZ48_25600 | Not Available | Negative | 5413460 - 5414329 | 32025.1 |
| abc transporter atp-binding protein | EXZ48_25605 | Not Available | Negative | 5414335 - 5415408 | 38293.4 |
| extracellular solute-binding protein | EXZ48_25610 | Not Available | Negative | 5415502 - 5416575 | 38678.1 |
| aldehyde dehydrogenase family protein | EXZ48_25615 | Not Available | Negative | 5416758 - 5418245 | 51279.8 |
| mandelate racemase/muconate lactonizing enzyme family protein | EXZ48_25620 | Not Available | Negative | 5418247 - 5419350 | 40989.6 |
| plp-dependent aminotransferase family protein | EXZ48_25625 | Not Available | Positive | 5419512 - 5421032 | 54768.8 |
| choline dehydrogenase | EXZ48_25630 | Not Available | Negative | 5421048 - 5422664 | 58636.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
