Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | EXZ48_25275 | Not Available | Positive | 5349185 - 5350240 | 38657.7 |
| duf4440 domain-containing protein | EXZ48_25280 | Not Available | Negative | 5350248 - 5350616 | 14335.1 |
| pyridoxamine 5'-phosphate oxidase | EXZ48_25285 | Not Available | Negative | 5350626 - 5351246 | 23477.8 |
| hypothetical protein | EXZ48_25290 | Not Available | Positive | 5351276 - 5351737 | 16013.9 |
| j domain-containing protein | EXZ48_25295 | Not Available | Positive | 5351836 - 5352897 | 38953.2 |
| enoyl-[acyl-carrier-protein] reductase fabi | EXZ48_25300 | Not Available | Positive | 5353030 - 5353848 | 29227.2 |
| histidine phosphatase family protein | EXZ48_25305 | Not Available | Positive | 5353877 - 5354458 | 21478.5 |
| duf1344 domain-containing protein | EXZ48_25310 | Not Available | Negative | 5354516 - 5354776 | 9365.19 |
| eal domain-containing protein | EXZ48_25315 | Not Available | Positive | 5355077 - 5358631 | 132811.0 |
| chorismate synthase | EXZ48_25320 | Not Available | Positive | 5358902 - 5359999 | 39297.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
