Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf983 domain-containing protein | EXZ48_25225 | Not Available | Negative | 5339656 - 5340039 | 13814.2 |
| cytochrome c oxidase subunit 3 | EXZ48_25230 | Not Available | Negative | 5340279 - 5341157 | 33133.5 |
| cytochrome c oxidase assembly protein | EXZ48_25235 | Not Available | Negative | 5341216 - 5341821 | 21972.6 |
| hypothetical protein | EXZ48_25240 | Not Available | Negative | 5341824 - 5341964 | 4950.28 |
| protoheme ix farnesyltransferase | EXZ48_25245 | Not Available | Negative | 5341964 - 5342908 | 33551.8 |
| cytochrome c oxidase subunit i | EXZ48_25250 | Not Available | Negative | 5342993 - 5344660 | 61389.8 |
| cytochrome c oxidase subunit ii | EXZ48_25255 | Not Available | Negative | 5344679 - 5345563 | 32325.1 |
| invasion associated locus b family protein | EXZ48_25260 | Not Available | Positive | 5345969 - 5346499 | 18376.3 |
| metalloprotease tldd | EXZ48_25265 | Not Available | Positive | 5346578 - 5347993 | 50057.2 |
| lysr family transcriptional regulator | EXZ48_25270 | Not Available | Negative | 5348023 - 5348919 | 33058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
