Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | EXZ48_25175 | Not Available | Positive | 5329547 - 5332459 | 106953.0 |
| hypothetical protein | EXZ48_25180 | Not Available | Negative | 5332467 - 5333522 | 39733.8 |
| csbd family protein | EXZ48_25185 | Not Available | Negative | 5333640 - 5333831 | 6250.53 |
| yqge/algh family protein | EXZ48_25190 | Not Available | Negative | 5333931 - 5334536 | 21726.1 |
| hypothetical protein | EXZ48_25195 | Not Available | Positive | 5334709 - 5335497 | 27438.8 |
| peroxiredoxin | EXZ48_25200 | Not Available | Positive | 5335612 - 5336097 | 16868.3 |
| ribonuclease hi | EXZ48_25205 | Not Available | Negative | 5336200 - 5336640 | 16187.2 |
| homoserine kinase | EXZ48_25210 | Not Available | Negative | 5336637 - 5337602 | 35694.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EXZ48_25215 | Not Available | Negative | 5337804 - 5338805 | 36284.3 |
| surf1 family protein | EXZ48_25220 | Not Available | Negative | 5338899 - 5339687 | 28516.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
