Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| matrixin family metalloprotease | EXZ48_25025 | Not Available | Positive | 5300028 - 5301404 | 48590.0 |
| hypothetical protein | EXZ48_25030 | Not Available | Positive | 5301623 - 5301958 | 11338.5 |
| class i sam-dependent methyltransferase | EXZ48_25035 | Not Available | Positive | 5302023 - 5302769 | 26766.6 |
| duf3597 domain-containing protein | EXZ48_25040 | Not Available | Negative | 5302957 - 5303397 | 15267.2 |
| Trna-gln | Not Available | Not Available | Positive | 5303563 - 5303637 | Not Available |
| cupin | EXZ48_25050 | Not Available | Positive | 5303864 - 5304160 | 10888.9 |
| mbl fold metallo-hydrolase | EXZ48_25055 | Not Available | Positive | 5304157 - 5305101 | 33615.9 |
| duf1499 domain-containing protein | EXZ48_25060 | Not Available | Negative | 5305133 - 5306038 | 32321.3 |
| hypothetical protein | EXZ48_25065 | Not Available | Positive | 5306297 - 5306680 | 13245.7 |
| hypothetical protein | EXZ48_25070 | Not Available | Positive | 5306892 - 5307140 | 9384.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
