Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_24975 | Not Available | Negative | 5294009 - 5295325 | 48074.3 |
| duf2934 domain-containing protein | EXZ48_24980 | Not Available | Positive | 5295542 - 5295766 | 8394.69 |
| hypothetical protein | EXZ48_24985 | Not Available | Positive | 5295836 - 5296018 | 6488.97 |
| hypothetical protein | EXZ48_24990 | Not Available | Positive | 5296178 - 5296357 | 6145.75 |
| ribbon-helix-helix protein, copg family | EXZ48_24995 | Not Available | Positive | 5296357 - 5296560 | 7772.37 |
| duf1508 domain-containing protein | EXZ48_25000 | Not Available | Positive | 5296712 - 5296894 | 6558.44 |
| winged helix-turn-helix transcriptional regulator | EXZ48_25005 | Not Available | Negative | 5296992 - 5297996 | 36569.9 |
| virulence-associated protein e | EXZ48_25010 | Not Available | Negative | 5297996 - 5298814 | 28548.0 |
| hypothetical protein | EXZ48_25015 | Not Available | Negative | 5298795 - 5299058 | 9938.89 |
| hypothetical protein | EXZ48_25020 | Not Available | Positive | 5299480 - 5299743 | 9978.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
