Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_24770 | Not Available | Positive | 5259998 - 5261248 | 43763.8 |
| efflux rnd transporter permease subunit | EXZ48_24775 | Not Available | Positive | 5261245 - 5264418 | 113178.0 |
| peptidase s41 | EXZ48_24780 | Not Available | Negative | 5264487 - 5265773 | 47194.1 |
| mfs transporter | EXZ48_24790 | Not Available | Negative | 5266411 - 5267877 | 50770.3 |
| tetr/acrr family transcriptional regulator | EXZ48_24795 | Not Available | Positive | 5268009 - 5268623 | 21947.3 |
| hypothetical protein | EXZ48_24800 | Not Available | Positive | 5268895 - 5269374 | 17500.4 |
| xre family transcriptional regulator | EXZ48_24805 | Not Available | Negative | 5269474 - 5270298 | 30842.8 |
| mfs transporter | EXZ48_24810 | Not Available | Positive | 5270394 - 5271851 | 50414.9 |
| xre family transcriptional regulator | EXZ48_24815 | Not Available | Negative | 5271934 - 5272725 | 30530.7 |
| mfs transporter | EXZ48_24820 | Not Available | Positive | 5272812 - 5274398 | 53973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
