Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | EXZ48_24720 | Not Available | Positive | 5250670 - 5251458 | 28990.4 |
| abc transporter atp-binding protein | EXZ48_24725 | Not Available | Positive | 5251461 - 5252519 | 38018.4 |
| sugar phosphate isomerase/epimerase | EXZ48_24730 | Not Available | Positive | 5252558 - 5253589 | 37726.4 |
| histidinol phosphate phosphatase | EXZ48_24735 | Not Available | Positive | 5253586 - 5254371 | 28670.3 |
| cu(i)-responsive transcriptional regulator | EXZ48_24740 | Not Available | Negative | 5254543 - 5254992 | 16852.0 |
| copper-translocating p-type atpase | EXZ48_24745 | Not Available | Negative | 5255054 - 5257549 | 86092.0 |
| copper chaperone | EXZ48_24750 | Not Available | Positive | 5257710 - 5257904 | 6680.92 |
| duf305 domain-containing protein | EXZ48_24755 | Not Available | Positive | 5257919 - 5258311 | 13917.1 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EXZ48_24760 | Not Available | Negative | 5258370 - 5259401 | 37065.2 |
| glutaredoxin family protein | EXZ48_24765 | Not Available | Negative | 5259398 - 5259598 | 7153.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
