Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_24670 | Not Available | Positive | 5239128 - 5239973 | 30299.6 |
| abc transporter atp-binding protein | EXZ48_24675 | Not Available | Positive | 5239973 - 5241796 | 66860.2 |
| deor/glpr transcriptional regulator | EXZ48_24680 | Not Available | Positive | 5241768 - 5242544 | 28814.7 |
| zn-dependent hydrolase | EXZ48_24685 | Not Available | Positive | 5242432 - 5243805 | 48319.4 |
| phosphotransferase | EXZ48_24690 | Not Available | Positive | 5243792 - 5244703 | 32672.4 |
| choline/ethanolamine kinase--aminoglycoside phosphotransferase | EXZ48_24695 | Not Available | Positive | 5244716 - 5245654 | 35115.5 |
| histidinol-phosphatase | EXZ48_24700 | Not Available | Positive | 5245668 - 5246441 | 27201.5 |
| plp-dependent aminotransferase family protein | EXZ48_24705 | Not Available | Negative | 5246913 - 5248442 | 55754.3 |
| abc transporter substrate-binding protein | EXZ48_24710 | Not Available | Positive | 5248606 - 5249724 | 39441.7 |
| abc transporter permease subunit | EXZ48_24715 | Not Available | Positive | 5249789 - 5250673 | 31785.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
