Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type dna transfer atpase virb11 | EXZ48_24565 | Not Available | Positive | 5215987 - 5217003 | 37585.9 |
| hypothetical protein | EXZ48_24575 | Not Available | Positive | 5218325 - 5218825 | 17830.5 |
| gntr family transcriptional regulator | EXZ48_24580 | Not Available | Negative | 5218905 - 5219594 | 25908.2 |
| hypothetical protein | EXZ48_24585 | Not Available | Positive | 5219746 - 5220738 | 34703.6 |
| sugar abc transporter atp-binding protein | EXZ48_24590 | Not Available | Positive | 5220818 - 5222323 | 53306.2 |
| abc transporter permease | EXZ48_24595 | Not Available | Positive | 5222326 - 5223315 | 34197.2 |
| nad(p)-dependent alcohol dehydrogenase | EXZ48_24600 | Not Available | Positive | 5223312 - 5224346 | 36160.4 |
| smp-30/gluconolactonase/lre family protein | EXZ48_24605 | Not Available | Positive | 5224343 - 5225275 | 33350.3 |
| glucose 1-dehydrogenase | EXZ48_24610 | Not Available | Positive | 5225275 - 5226060 | 26541.9 |
| age family epimerase/isomerase | EXZ48_24615 | Not Available | Positive | 5226075 - 5227271 | 46652.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
