Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | EXZ48_24400 | Not Available | Negative | 5185217 - 5185504 | 10222.1 |
| ti-type conjugative transfer relaxase traa | EXZ48_24405 | Not Available | Positive | 5185727 - 5190346 | 170343.0 |
| hypothetical protein | EXZ48_24410 | Not Available | Positive | 5190378 - 5190647 | 10141.0 |
| zeta toxin | EXZ48_24415 | Not Available | Positive | 5190650 - 5193121 | 91058.7 |
| lysr family transcriptional regulator | EXZ48_24420 | Not Available | Negative | 5193341 - 5194207 | 31705.4 |
| quinone oxidoreductase | EXZ48_24425 | Not Available | Positive | 5194277 - 5195248 | 33715.0 |
| hypothetical protein | EXZ48_24430 | Not Available | Negative | 5195298 - 5195618 | 11595.2 |
| class i sam-dependent methyltransferase | EXZ48_24435 | Not Available | Negative | 5195714 - 5196700 | 37812.6 |
| arac family transcriptional regulator | EXZ48_24440 | Not Available | Positive | 5196973 - 5197854 | 32730.8 |
| mfs transporter | EXZ48_24445 | Not Available | Positive | 5197936 - 5199186 | 43813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
