Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_24350 | Not Available | Negative | 5179981 - 5180264 | 10599.8 |
| xre family transcriptional regulator | EXZ48_24355 | Not Available | Positive | 5180366 - 5180605 | 8338.71 |
| hypothetical protein | EXZ48_24360 | Not Available | Negative | 5180705 - 5180905 | 7471.15 |
| duf982 domain-containing protein | EXZ48_24365 | Not Available | Positive | 5181191 - 5181493 | 11033.3 |
| csbd family protein | EXZ48_24370 | Not Available | Positive | 5181558 - 5181761 | 8233.45 |
| hypothetical protein | EXZ48_24375 | Not Available | Negative | 5181809 - 5181994 | 6580.54 |
| duf2934 domain-containing protein | EXZ48_24380 | Not Available | Positive | 5182185 - 5182382 | 7480.6 |
| hypothetical protein | EXZ48_24385 | Not Available | Positive | 5182735 - 5183043 | 11083.1 |
| ti-type conjugative transfer system protein trag | EXZ48_24390 | Not Available | Negative | 5183081 - 5185000 | 70408.9 |
| conjugal transfer protein trad | EXZ48_24395 | Not Available | Negative | 5184997 - 5185227 | 8272.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
