Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | EXZ48_24300 | Not Available | Negative | 5170518 - 5171579 | 38911.6 |
| arginase | EXZ48_24305 | Not Available | Negative | 5171605 - 5172525 | 32666.3 |
| lrp/asnc family transcriptional regulator | EXZ48_24310 | Not Available | Positive | 5172645 - 5173082 | 15919.3 |
| n-acetyltransferase | EXZ48_24315 | Not Available | Negative | 5173122 - 5173658 | 19690.8 |
| glutathione s-transferase family protein | EXZ48_24320 | Not Available | Negative | 5173655 - 5174302 | 24228.0 |
| amidohydrolase | EXZ48_24325 | Not Available | Negative | 5174542 - 5175738 | 42567.9 |
| m24 family metallopeptidase | EXZ48_24330 | Not Available | Negative | 5175725 - 5176903 | 43109.7 |
| ectoine utilization protein euta | EXZ48_24335 | Not Available | Negative | 5176936 - 5177688 | 26523.0 |
| plp-dependent aminotransferase family protein | EXZ48_24340 | Not Available | Negative | 5177827 - 5179209 | 49529.8 |
| chemotaxis protein | EXZ48_24345 | Not Available | Negative | 5179690 - 5179980 | 10013.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
