Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXZ48_24200 | Not Available | Negative | 5150877 - 5151767 | 32815.2 |
| lysr family transcriptional regulator | EXZ48_24205 | Not Available | Negative | 5151798 - 5152706 | 32594.9 |
| cysteine hydrolase | EXZ48_24210 | Not Available | Positive | 5152815 - 5153489 | 24556.3 |
| gyd domain-containing protein | EXZ48_24215 | Not Available | Positive | 5153486 - 5153797 | 11554.9 |
| transporter substrate-binding domain-containing protein | EXZ48_24220 | Not Available | Positive | 5153926 - 5154744 | 29197.9 |
| amino acid abc transporter permease | EXZ48_24225 | Not Available | Positive | 5154763 - 5155440 | 24839.3 |
| amino acid abc transporter atp-binding protein | EXZ48_24230 | Not Available | Positive | 5155466 - 5156230 | 28535.8 |
| mbl fold metallo-hydrolase | EXZ48_24235 | Not Available | Positive | 5156242 - 5156964 | 26040.0 |
| n-acetyltransferase | EXZ48_24240 | Not Available | Negative | 5156999 - 5157277 | 10210.2 |
| lysr family transcriptional regulator | EXZ48_24245 | Not Available | Positive | 5157548 - 5158528 | 35746.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
