Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_24040 | Not Available | Positive | 5120121 - 5120603 | 17608.5 |
| thiamine pyrophosphate-binding protein | EXZ48_24045 | Not Available | Positive | 5120664 - 5122292 | 56150.1 |
| opgc domain-containing protein | EXZ48_24050 | Not Available | Positive | 5122195 - 5123418 | 44904.5 |
| coa transferase | EXZ48_24055 | Not Available | Positive | 5123424 - 5124641 | 42906.2 |
| poly(3-hydroxybutyrate) depolymerase | EXZ48_24060 | Not Available | Positive | 5124644 - 5125450 | 28475.2 |
| hypothetical protein | EXZ48_24065 | Not Available | Positive | 5125571 - 5126095 | 18590.5 |
| yhs domain-containing protein | EXZ48_24070 | Not Available | Positive | 5126166 - 5126624 | 16376.4 |
| lysr family transcriptional regulator | EXZ48_24075 | Not Available | Negative | 5126674 - 5127576 | 33870.2 |
| 5-oxoprolinase subunit pxpa | EXZ48_24080 | Not Available | Positive | 5127832 - 5128605 | 27993.3 |
| biotin carboxyl carrier domain-containing protein | EXZ48_24085 | Not Available | Positive | 5128685 - 5128927 | 8566.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
