Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_23890 | Not Available | Negative | 5083915 - 5085297 | 52352.6 |
| duf4038 domain-containing protein | EXZ48_23895 | Not Available | Negative | 5086139 - 5087479 | 47995.5 |
| glycosyltransferase family 1 protein | EXZ48_23900 | Not Available | Negative | 5087507 - 5088703 | 43560.0 |
| hypothetical protein | EXZ48_23905 | Not Available | Positive | 5088904 - 5090118 | 44490.7 |
| sugar transporter | EXZ48_23910 | Not Available | Positive | 5090263 - 5091735 | 52169.2 |
| glycosyltransferase family 2 protein | EXZ48_23915 | Not Available | Positive | 5091739 - 5092710 | 35907.4 |
| class i sam-dependent methyltransferase | EXZ48_23920 | Not Available | Positive | 5092736 - 5093548 | 30458.8 |
| exopolysaccharide biosynthesis protein | EXZ48_23925 | Not Available | Negative | 5093711 - 5094976 | 45670.0 |
| polysaccharide biosynthesis protein | EXZ48_23930 | Not Available | Negative | 5094980 - 5097166 | 76838.9 |
| response regulator transcription factor | EXZ48_23935 | Not Available | Negative | 5097192 - 5097989 | 28909.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
