Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase | EXZ48_23785 | Not Available | Negative | 5060751 - 5061947 | 42983.9 |
| fad-binding oxidoreductase | EXZ48_23790 | Not Available | Negative | 5061972 - 5063222 | 45885.4 |
| murr/rpir family transcriptional regulator | EXZ48_23795 | Not Available | Positive | 5063427 - 5064293 | 31868.8 |
| atp-binding cassette domain-containing protein | EXZ48_23800 | Not Available | Negative | 5064316 - 5065107 | 28975.2 |
| abc transporter permease | EXZ48_23805 | Not Available | Negative | 5065100 - 5065825 | 26775.4 |
| abc transporter permease subunit | EXZ48_23810 | Not Available | Negative | 5065825 - 5066544 | 25055.9 |
| flavin reductase family protein | EXZ48_23815 | Not Available | Negative | 5066821 - 5067465 | 23675.5 |
| gntr family transcriptional regulator | EXZ48_23820 | Not Available | Positive | 5067751 - 5068455 | 25306.4 |
| amidase | EXZ48_23825 | Not Available | Positive | 5068638 - 5069774 | 41245.1 |
| antar domain-containing protein | EXZ48_23830 | Not Available | Positive | 5069771 - 5070355 | 21365.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
