Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | EXZ48_23685 | Not Available | Positive | 5035873 - 5038434 | 95280.1 |
| metal-dependent hydrolase | EXZ48_23690 | Not Available | Negative | 5038551 - 5039750 | 41832.1 |
| l,d-transpeptidase | EXZ48_23695 | Not Available | Negative | 5039842 - 5040546 | 25958.1 |
| murein l,d-transpeptidase | EXZ48_23700 | Not Available | Negative | 5040561 - 5041604 | 38115.8 |
| merr family transcriptional regulator | EXZ48_23705 | Not Available | Positive | 5041974 - 5042390 | 16024.0 |
| sco family protein | EXZ48_23710 | Not Available | Negative | 5042397 - 5042966 | 20531.9 |
| cadmium-translocating p-type atpase | EXZ48_23715 | Not Available | Negative | 5042963 - 5045251 | 78451.1 |
| carboxynorspermidine decarboxylase | EXZ48_23720 | Not Available | Positive | 5045785 - 5046885 | 41123.0 |
| saccharopine dehydrogenase family protein | EXZ48_23725 | Not Available | Positive | 5046921 - 5048159 | 44870.7 |
| lysr family transcriptional regulator | EXZ48_23730 | Not Available | Positive | 5048287 - 5049144 | 31477.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
