Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_23485 | Not Available | Negative | 5000062 - 5000481 | 15240.7 |
| fad-binding protein | EXZ48_23490 | Not Available | Negative | 5000484 - 5001698 | 42024.9 |
| fad-binding protein | EXZ48_23495 | Not Available | Negative | 5001695 - 5003131 | 50140.5 |
| lysr family transcriptional regulator | EXZ48_23500 | Not Available | Positive | 5003446 - 5004342 | 32613.4 |
| hypothetical protein | EXZ48_23505 | Not Available | Positive | 5004423 - 5004935 | 18017.3 |
| hypothetical protein | EXZ48_23510 | Not Available | Positive | 5005111 - 5005617 | 17737.0 |
| hlyd family secretion protein | EXZ48_23515 | Not Available | Positive | 5005610 - 5006842 | 44086.4 |
| duf3422 family protein | EXZ48_23520 | Not Available | Negative | 5006891 - 5008168 | 46788.2 |
| fadr family transcriptional regulator | EXZ48_23525 | Not Available | Positive | 5008312 - 5009106 | 29732.6 |
| nudix hydrolase | EXZ48_23530 | Not Available | Positive | 5009188 - 5009691 | 18564.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
