Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase regulatory subunit | EXZ48_23435 | Not Available | Negative | 4991158 - 4992291 | 40479.7 |
| histidine--trna ligase | EXZ48_23440 | Not Available | Negative | 4992293 - 4993816 | 55907.5 |
| xre family transcriptional regulator | EXZ48_23445 | Not Available | Negative | 4993903 - 4994691 | 29330.4 |
| hypothetical protein | EXZ48_23450 | Not Available | Positive | 4994787 - 4995218 | 15302.4 |
| hypothetical protein | EXZ48_23455 | Not Available | Negative | 4995376 - 4995594 | 7790.27 |
| dna-3-methyladenine glycosylase i | EXZ48_23460 | Not Available | Negative | 4995754 - 4996380 | 23716.1 |
| l,d-transpeptidase | EXZ48_23465 | Not Available | Positive | 4996599 - 4997339 | 27316.3 |
| l,d-transpeptidase | EXZ48_23470 | Not Available | Positive | 4997471 - 4998178 | 25554.6 |
| hypothetical protein | EXZ48_23475 | Not Available | Negative | 4998233 - 4998676 | 15882.9 |
| glycolate oxidase subunit glcf | EXZ48_23480 | Not Available | Negative | 4998752 - 5000050 | 46530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
