Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase cysq | EXZ48_23335 | Not Available | Negative | 4967478 - 4968284 | 28178.4 |
| tldd/pmba family protein | EXZ48_23340 | Not Available | Negative | 4968289 - 4969635 | 46627.9 |
| potassium transporter trka | EXZ48_23345 | Not Available | Positive | 4969746 - 4971539 | 64055.9 |
| patatin-like phospholipase family protein | EXZ48_23350 | Not Available | Negative | 4971616 - 4972482 | 30449.2 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | EXZ48_23355 | Not Available | Negative | 4972525 - 4973085 | 20184.2 |
| pseudouridine synthase | EXZ48_23360 | Not Available | Negative | 4973092 - 4975035 | 70599.2 |
| nucleoside deaminase | EXZ48_23365 | Not Available | Positive | 4975121 - 4975549 | 14917.7 |
| gnat family n-acetyltransferase | EXZ48_23370 | Not Available | Negative | 4975550 - 4976035 | 17699.9 |
| hypothetical protein | EXZ48_23375 | Not Available | Negative | 4976039 - 4976653 | 22687.8 |
| isoleucine--trna ligase | EXZ48_23380 | Not Available | Negative | 4976823 - 4979714 | 107824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
