Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | EXZ48_23285 | Not Available | Negative | 4956240 - 4956575 | 12661.4 |
| eal domain-containing protein | EXZ48_23290 | Not Available | Negative | 4956691 - 4958046 | 49413.1 |
| calcium-binding protein | EXZ48_23295 | Not Available | Positive | 4958337 - 4959344 | 34991.8 |
| response regulator | EXZ48_23300 | Not Available | Negative | 4959366 - 4961105 | 64424.7 |
| dna mismatch repair endonuclease mutl | EXZ48_23305 | Not Available | Positive | 4961371 - 4963179 | 64927.5 |
| duf2093 domain-containing protein | EXZ48_23310 | Not Available | Positive | 4963428 - 4963664 | 8819.61 |
| tetraacyldisaccharide 4'-kinase | EXZ48_23315 | Not Available | Negative | 4963730 - 4964770 | 37537.1 |
| had family hydrolase | EXZ48_23320 | Not Available | Negative | 4965010 - 4965744 | 25360.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | EXZ48_23325 | Not Available | Negative | 4965758 - 4967071 | 48683.2 |
| duf4170 domain-containing protein | EXZ48_23330 | Not Available | Negative | 4967180 - 4967416 | 8913.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
