Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | EXZ48_23235 | Not Available | Negative | 4946724 - 4947467 | 27861.5 |
| luxr family transcriptional regulator | EXZ48_23240 | Not Available | Negative | 4947552 - 4948289 | 26922.8 |
| iclr family transcriptional regulator | EXZ48_23245 | Not Available | Negative | 4948553 - 4949341 | 28434.2 |
| sdr family oxidoreductase | EXZ48_23250 | Not Available | Positive | 4949444 - 4950205 | 26636.1 |
| 2-dehydro-3-deoxygalactonokinase | EXZ48_23255 | Not Available | Positive | 4950205 - 4951140 | 31131.4 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | EXZ48_23260 | Not Available | Positive | 4951200 - 4951838 | 21793.6 |
| smp-30/gluconolactonase/lre family protein | EXZ48_23265 | Not Available | Positive | 4951835 - 4952719 | 31395.1 |
| prc-barrel domain containing protein | EXZ48_23270 | Not Available | Positive | 4952918 - 4953595 | 22866.1 |
| trimethylamine methyltransferase | EXZ48_23275 | Not Available | Negative | 4953674 - 4955233 | 56537.6 |
| lysr family transcriptional regulator | EXZ48_23280 | Not Available | Positive | 4955310 - 4956236 | 33904.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
