Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hepn domain-containing protein | EXZ48_23185 | Not Available | Positive | 4935657 - 4936181 | 19447.5 |
| hypothetical protein | EXZ48_23190 | Not Available | Negative | 4936415 - 4936861 | 16057.7 |
| hypothetical protein | EXZ48_23195 | Not Available | Negative | 4936974 - 4937702 | 26818.0 |
| phosphodiesterase | EXZ48_23200 | Not Available | Positive | 4937881 - 4939710 | 68085.9 |
| globin-coupled sensor protein | EXZ48_23205 | Not Available | Positive | 4939707 - 4941230 | 54216.2 |
| hypothetical protein | EXZ48_23210 | Not Available | Positive | 4941278 - 4941541 | 9645.38 |
| hypothetical protein | EXZ48_23215 | Not Available | Positive | 4941543 - 4941821 | 10344.5 |
| potassium transporter kup | EXZ48_23220 | Not Available | Negative | 4942395 - 4944296 | 69132.6 |
| magnesium transporter | EXZ48_23225 | Not Available | Negative | 4944310 - 4945293 | 36346.3 |
| iron-sulfur cluster carrier protein apbc | EXZ48_23230 | Not Available | Negative | 4945433 - 4946608 | 41331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
