Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr family transcriptional regulator | EXZ48_23120 | Not Available | Negative | 4921232 - 4921951 | 27534.8 |
| coa transferase | EXZ48_23125 | Not Available | Negative | 4922252 - 4923469 | 44166.9 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EXZ48_23130 | Not Available | Positive | 4923699 - 4924805 | 39946.5 |
| extracellular solute-binding protein | EXZ48_23135 | Not Available | Positive | 4925007 - 4926353 | 49351.6 |
| sugar abc transporter permease | EXZ48_23140 | Not Available | Positive | 4926406 - 4927278 | 31953.9 |
| carbohydrate abc transporter permease | EXZ48_23145 | Not Available | Positive | 4927281 - 4928234 | 34868.4 |
| glucose-methanol-choline oxidoreductase | EXZ48_23150 | Not Available | Positive | 4928313 - 4929920 | 57877.4 |
| hypothetical protein | EXZ48_23155 | Not Available | Negative | 4930102 - 4930401 | 11261.1 |
| hypothetical protein | EXZ48_23165 | Not Available | Positive | 4930601 - 4931110 | 18893.2 |
| duf2958 domain-containing protein | EXZ48_23180 | Not Available | Negative | 4934752 - 4935729 | 36653.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
