Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | EXZ48_23070 | Not Available | Negative | 4906649 - 4908052 | 49738.3 |
| plp-dependent cysteine synthase family protein | EXZ48_23075 | Not Available | Positive | 4908838 - 4909959 | 40847.2 |
| plasmid partitioning protein repa | EXZ48_23080 | Not Available | Positive | 4910307 - 4911506 | 44450.1 |
| plasmid partitioning protein repb | EXZ48_23085 | Not Available | Positive | 4911510 - 4912526 | 37346.4 |
| replication initiation protein repc | EXZ48_23090 | Not Available | Positive | 4912677 - 4913891 | 44334.3 |
| duf1403 family protein | EXZ48_23095 | Not Available | Positive | 4914236 - 4915189 | 33196.0 |
| smc-scp complex subunit scpb | EXZ48_23100 | Not Available | Positive | 4915191 - 4915883 | 25417.2 |
| hypothetical protein | EXZ48_23105 | Not Available | Negative | 4915928 - 4916428 | 18626.7 |
| is5 family transposase | EXZ48_23110 | Not Available | Positive | 4916544 - 4917307 | 28903.3 |
| tetratricopeptide repeat protein | EXZ48_23115 | Not Available | Negative | 4917294 - 4920743 | 125860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
