Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EXZ48_23020 | Not Available | Negative | 4897453 - 4898481 | 36572.7 |
| benzoate 1,2-dioxygenase small subunit | EXZ48_23025 | Not Available | Negative | 4898518 - 4899006 | 18972.3 |
| benzoate 1,2-dioxygenase large subunit | EXZ48_23030 | Not Available | Negative | 4899003 - 4900361 | 50943.9 |
| catechol 1,2-dioxygenase | EXZ48_23035 | Not Available | Negative | 4900438 - 4901376 | 34003.1 |
| muconolactone delta-isomerase | EXZ48_23040 | Not Available | Negative | 4901425 - 4901715 | 11011.2 |
| muconate cycloisomerase | EXZ48_23045 | Not Available | Negative | 4901728 - 4902873 | 40588.2 |
| alpha/beta hydrolase | EXZ48_23050 | Not Available | Negative | 4903372 - 4904064 | 24603.2 |
| 3-oxoadipate enol-lactonase | EXZ48_23055 | Not Available | Negative | 4904210 - 4904998 | 28241.9 |
| lysr family transcriptional regulator | EXZ48_23060 | Not Available | Positive | 4905166 - 4906089 | 34655.2 |
| duf983 domain-containing protein | EXZ48_23065 | Not Available | Negative | 4906106 - 4906492 | 14003.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
