Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_22970 | Not Available | Negative | 4886349 - 4887413 | 38126.1 |
| carbohydrate abc transporter permease | EXZ48_22975 | Not Available | Negative | 4887415 - 4888233 | 30509.2 |
| sugar abc transporter permease | EXZ48_22980 | Not Available | Negative | 4888239 - 4889216 | 35843.6 |
| extracellular solute-binding protein | EXZ48_22985 | Not Available | Negative | 4889197 - 4890609 | 49866.1 |
| fadr family transcriptional regulator | EXZ48_22990 | Not Available | Positive | 4890311 - 4891501 | 42402.1 |
| lrp/asnc family transcriptional regulator | EXZ48_22995 | Not Available | Negative | 4891526 - 4892020 | 17860.8 |
| transketolase | EXZ48_23000 | Not Available | Positive | 4892153 - 4894528 | 86577.7 |
| hypothetical protein | EXZ48_23005 | Not Available | Negative | 4894655 - 4895158 | 18573.8 |
| mfs transporter | EXZ48_23010 | Not Available | Negative | 4895303 - 4896634 | 47533.4 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | EXZ48_23015 | Not Available | Negative | 4896668 - 4897456 | 26958.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
