Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_22920 | Not Available | Negative | 4875626 - 4876606 | 33539.1 |
| sugar abc transporter atp-binding protein | EXZ48_22925 | Not Available | Negative | 4876603 - 4878117 | 53912.6 |
| sugar phosphate isomerase/epimerase | EXZ48_22930 | Not Available | Negative | 4878114 - 4878962 | 31113.1 |
| sugar phosphate isomerase/epimerase | EXZ48_22935 | Not Available | Negative | 4878970 - 4879926 | 34808.5 |
| arac family transcriptional regulator | EXZ48_22940 | Not Available | Positive | 4879995 - 4881038 | 39237.3 |
| sdr family oxidoreductase | EXZ48_22945 | Not Available | Negative | 4881025 - 4881792 | 27025.5 |
| hypothetical protein | EXZ48_22950 | Not Available | Negative | 4881794 - 4882687 | 32060.8 |
| dihydrodipicolinate synthase family protein | EXZ48_22955 | Not Available | Negative | 4882684 - 4883592 | 32014.6 |
| fad-binding protein | EXZ48_22960 | Not Available | Negative | 4883589 - 4885202 | 57841.9 |
| galactonate dehydratase | EXZ48_22965 | Not Available | Negative | 4885204 - 4886352 | 42241.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
