Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein | EXZ48_22820 | Not Available | Positive | 4856141 - 4857388 | 45105.9 |
| sugar abc transporter permease | EXZ48_22825 | Not Available | Positive | 4857456 - 4858349 | 32538.5 |
| carbohydrate abc transporter permease | EXZ48_22830 | Not Available | Positive | 4858342 - 4859217 | 31359.1 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EXZ48_22835 | Not Available | Positive | 4859222 - 4860322 | 39672.2 |
| gmc family oxidoreductase | EXZ48_22840 | Not Available | Positive | 4860333 - 4861838 | 54098.2 |
| alanine-phosphoribitol ligase | EXZ48_22845 | Not Available | Positive | 4861835 - 4863481 | 59401.0 |
| had family phosphatase | EXZ48_22850 | Not Available | Positive | 4863557 - 4864186 | 22691.0 |
| deor/glpr transcriptional regulator | EXZ48_22855 | Not Available | Positive | 4864183 - 4864965 | 27334.8 |
| glycoside hydrolase family 3 protein | EXZ48_22860 | Not Available | Positive | 4864980 - 4865984 | 34806.0 |
| mfs transporter | EXZ48_22865 | Not Available | Positive | 4866026 - 4867222 | 40543.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
