Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrous oxide reductase family maturation protein nosd | EXZ48_22720 | Not Available | Positive | 4835501 - 4836847 | 47910.6 |
| abc transporter atp-binding protein | EXZ48_22725 | Not Available | Positive | 4836853 - 4837755 | 32436.2 |
| abc transporter permease | EXZ48_22730 | Not Available | Positive | 4837752 - 4838567 | 27598.7 |
| copper resistance protein copz | EXZ48_22735 | Not Available | Positive | 4838564 - 4839097 | 18921.3 |
| fad:protein fmn transferase | EXZ48_22740 | Not Available | Positive | 4839100 - 4840071 | 34468.2 |
| diguanylate cyclase | EXZ48_22745 | Not Available | Negative | 4840117 - 4841415 | 48129.3 |
| hypothetical protein | EXZ48_22750 | Not Available | Positive | 4841712 - 4842356 | 23938.6 |
| pyridoxal-phosphate dependent enzyme | EXZ48_22755 | Not Available | Negative | 4842419 - 4843384 | 33335.1 |
| amino acid abc transporter atp-binding protein | EXZ48_22760 | Not Available | Negative | 4843399 - 4844130 | 26696.7 |
| abc transporter permease subunit | EXZ48_22765 | Not Available | Negative | 4844127 - 4844864 | 26098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
