Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline/glycine betaine abc transporter atp-binding protein prov | EXZ48_22670 | Not Available | Negative | 4823534 - 4824766 | 44394.4 |
| sigma-70 family rna polymerase sigma factor | EXZ48_22675 | Not Available | Positive | 4825308 - 4825862 | 20746.7 |
| duf1109 family protein | EXZ48_22680 | Not Available | Positive | 4825864 - 4826499 | 22236.1 |
| sdr family nad(p)-dependent oxidoreductase | EXZ48_22685 | Not Available | Negative | 4826599 - 4827387 | 27069.9 |
| alpha/beta hydrolase | EXZ48_22690 | Not Available | Negative | 4827469 - 4828296 | 30672.1 |
| glxa family transcriptional regulator | EXZ48_22695 | Not Available | Positive | 4828427 - 4829380 | 35133.1 |
| iron-sulfur cluster repair di-iron protein | EXZ48_22700 | Not Available | Positive | 4829484 - 4830149 | 24247.0 |
| rubrerythrin family protein | EXZ48_22705 | Not Available | Negative | 4830269 - 4831123 | 31022.5 |
| regulatory protein nosr | EXZ48_22710 | Not Available | Positive | 4831290 - 4833545 | 83070.1 |
| nitrous-oxide reductase | EXZ48_22715 | Not Available | Positive | 4833568 - 4835481 | 70515.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
