Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | EXZ48_22615 | Not Available | Positive | 4811472 - 4813922 | 88305.4 |
| hypothetical protein | EXZ48_22625 | Not Available | Negative | 4814451 - 4814690 | 9199.76 |
| sigma-54-dependent fis family transcriptional regulator | EXZ48_22630 | Not Available | Negative | 4814690 - 4816069 | 50700.9 |
| sensor histidine kinase | EXZ48_22635 | Not Available | Negative | 4816066 - 4817865 | 65169.4 |
| dicarboxylate/amino acid:cation symporter | EXZ48_22640 | Not Available | Positive | 4818090 - 4819421 | 46461.1 |
| lrp/asnc family transcriptional regulator | EXZ48_22645 | Not Available | Negative | 4819472 - 4819930 | 17329.0 |
| cystathionine gamma-synthase family protein | EXZ48_22650 | Not Available | Positive | 4820056 - 4821339 | 45559.5 |
| xre family transcriptional regulator | EXZ48_22655 | Not Available | Negative | 4821345 - 4821617 | 9756.48 |
| glycine betaine abc transporter substrate-binding protein | EXZ48_22660 | Not Available | Negative | 4821694 - 4822569 | 32003.3 |
| proline/glycine betaine abc transporter permease | EXZ48_22665 | Not Available | Negative | 4822626 - 4823510 | 30844.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
