Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXZ48_22565 | Not Available | Negative | 4798028 - 4798903 | 31915.6 |
| na/pi cotransporter family protein | EXZ48_22570 | Not Available | Positive | 4799017 - 4800669 | 58034.1 |
| 2-aminoethylphosphonate--pyruvate transaminase | EXZ48_22575 | Not Available | Positive | 4800773 - 4801975 | 43653.4 |
| phosphonoacetate hydrolase | EXZ48_22580 | Not Available | Positive | 4801993 - 4803255 | 45995.0 |
| phosphonoacetaldehyde dehydrogenase | EXZ48_22585 | Not Available | Positive | 4803266 - 4804720 | 53040.2 |
| putative 2-aminoethylphosphonate abc transporter substrate-binding protein | EXZ48_22590 | Not Available | Positive | 4805017 - 4806039 | 36910.8 |
| putative 2-aminoethylphosphonate abc transporter atp-binding protein | EXZ48_22595 | Not Available | Positive | 4806119 - 4807282 | 41899.5 |
| putative 2-aminoethylphosphonate abc transporter permease subunit | EXZ48_22600 | Not Available | Positive | 4807285 - 4809300 | 72787.0 |
| glxa family transcriptional regulator | EXZ48_22605 | Not Available | Negative | 4809373 - 4810410 | 38200.1 |
| deor/glpr transcriptional regulator | EXZ48_22610 | Not Available | Positive | 4810583 - 4811383 | 28666.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
