Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXZ48_22460 | Not Available | Negative | 4770649 - 4771503 | 31921.3 |
| trehalose-phosphatase | EXZ48_22465 | Not Available | Negative | 4771814 - 4772629 | 28528.1 |
| rok family protein | EXZ48_22470 | Not Available | Positive | 4772742 - 4773821 | 38519.4 |
| diguanylate cyclase | EXZ48_22475 | Not Available | Negative | 4773920 - 4775707 | 65153.3 |
| calcium:proton antiporter | EXZ48_22480 | Not Available | Negative | 4775839 - 4776984 | 39945.2 |
| chat domain-containing protein | EXZ48_22485 | Not Available | Negative | 4777144 - 4780278 | 114029.0 |
| pspa/im30 family protein | EXZ48_22490 | Not Available | Positive | 4780575 - 4781708 | 40212.1 |
| duf1449 family protein | EXZ48_22495 | Not Available | Positive | 4781708 - 4782364 | 22588.3 |
| methyl-accepting chemotaxis protein | EXZ48_22505 | Not Available | Negative | 4782765 - 4784285 | 54297.1 |
| tetr/acrr family transcriptional regulator | EXZ48_22510 | Not Available | Negative | 4784492 - 4785121 | 24136.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
