Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylanthranilate isomerase | EXZ48_22410 | Not Available | Negative | 4757367 - 4758128 | 26280.4 |
| murr/rpir family transcriptional regulator | EXZ48_22415 | Not Available | Negative | 4758064 - 4758918 | 30087.1 |
| extracellular solute-binding protein | EXZ48_22420 | Not Available | Positive | 4759022 - 4760317 | 45992.5 |
| sugar abc transporter permease | EXZ48_22425 | Not Available | Positive | 4760380 - 4761273 | 32689.7 |
| carbohydrate abc transporter permease | EXZ48_22430 | Not Available | Positive | 4761270 - 4762109 | 30727.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EXZ48_22435 | Not Available | Positive | 4762114 - 4763316 | 43424.9 |
| carbohydrate kinase family protein | EXZ48_22440 | Not Available | Positive | 4763326 - 4764258 | 31608.0 |
| aminotransferase | EXZ48_22445 | Not Available | Positive | 4764536 - 4765669 | 41049.6 |
| ggdef and eal domain-containing protein | EXZ48_22450 | Not Available | Negative | 4765736 - 4768153 | 86524.1 |
| methyl-accepting chemotaxis protein | EXZ48_22455 | Not Available | Negative | 4768274 - 4770202 | 68291.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
