Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | EXZ48_22360 | Not Available | Negative | 4746824 - 4748449 | 57498.8 |
| thioredoxin family protein | EXZ48_22365 | Not Available | Negative | 4748487 - 4749074 | 20722.3 |
| hypothetical protein | EXZ48_22370 | Not Available | Positive | 4749136 - 4749486 | 13425.9 |
| glutamine synthetase | EXZ48_22375 | Not Available | Positive | 4749512 - 4750552 | 38511.1 |
| abc transporter substrate-binding protein | EXZ48_22380 | Not Available | Positive | 4750755 - 4751798 | 37460.3 |
| abc transporter atp-binding protein | EXZ48_22385 | Not Available | Positive | 4751810 - 4752946 | 41431.1 |
| abc transporter permease | EXZ48_22390 | Not Available | Positive | 4752949 - 4754196 | 44583.5 |
| abc transporter permease | EXZ48_22395 | Not Available | Positive | 4754201 - 4755010 | 28765.0 |
| lysr family transcriptional regulator | EXZ48_22400 | Not Available | Negative | 4755011 - 4755886 | 32010.6 |
| m24 family metallopeptidase | EXZ48_22405 | Not Available | Negative | 4755955 - 4757169 | 45608.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
