Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | EXZ48_22310 | Not Available | Negative | 4736590 - 4737165 | 20511.3 |
| mfs transporter | EXZ48_22315 | Not Available | Positive | 4737253 - 4738728 | 50815.3 |
| cytosine deaminase | EXZ48_22320 | Not Available | Negative | 4738760 - 4739947 | 42737.4 |
| heme-binding protein | EXZ48_22325 | Not Available | Negative | 4740059 - 4740490 | 14344.4 |
| d-amino acid dehydrogenase | EXZ48_22330 | Not Available | Negative | 4740578 - 4741819 | 45726.6 |
| mfs transporter | EXZ48_22335 | Not Available | Negative | 4742095 - 4743525 | 49144.4 |
| aliphatic sulfonate abc transporter substrate-binding protein | EXZ48_22340 | Not Available | Negative | 4743680 - 4744714 | 36815.9 |
| abc transporter permease | EXZ48_22345 | Not Available | Negative | 4744767 - 4745630 | 30952.6 |
| abc transporter atp-binding protein | EXZ48_22350 | Not Available | Negative | 4745642 - 4746478 | 30833.9 |
| ferredoxin family protein | EXZ48_22355 | Not Available | Negative | 4746492 - 4746821 | 12154.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
