Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | EXZ48_22255 | Not Available | Negative | 4725153 - 4726340 | 41073.3 |
| 3-hydroxyacyl-coa dehydrogenase | EXZ48_22260 | Not Available | Negative | 4726364 - 4727131 | 26175.8 |
| arac family transcriptional regulator | EXZ48_22265 | Not Available | Positive | 4727323 - 4728321 | 37113.1 |
| multidrug efflux smr transporter | EXZ48_22270 | Not Available | Negative | 4728395 - 4728739 | 11650.6 |
| fmn-dependent nadh-azoreductase | EXZ48_22275 | Not Available | Negative | 4728736 - 4729380 | 23030.7 |
| lysr family transcriptional regulator | EXZ48_22280 | Not Available | Positive | 4729471 - 4730313 | 30289.6 |
| aldolase | EXZ48_22290 | Not Available | Negative | 4730970 - 4731521 | 19713.0 |
| isocitrate/isopropylmalate dehydrogenase family protein | EXZ48_22295 | Not Available | Negative | 4731666 - 4732754 | 38969.5 |
| gntr family transcriptional regulator | EXZ48_22300 | Not Available | Negative | 4732843 - 4733769 | 36119.2 |
| aconitate hydratase acna | EXZ48_22305 | Not Available | Positive | 4733964 - 4736543 | 91703.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
