Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_22205 | Not Available | Negative | 4713311 - 4714837 | 53927.3 |
| bmp family abc transporter substrate-binding protein | EXZ48_22210 | Not Available | Negative | 4714957 - 4715982 | 36731.6 |
| enoyl-coa hydratase | EXZ48_22215 | Not Available | Negative | 4716242 - 4717042 | 28401.6 |
| 3-hydroxyisobutyrate dehydrogenase | EXZ48_22220 | Not Available | Negative | 4717048 - 4717938 | 29778.0 |
| enoyl-coa hydratase/isomerase family protein | EXZ48_22225 | Not Available | Negative | 4717935 - 4719005 | 38693.4 |
| dihydrolipoyl dehydrogenase | EXZ48_22230 | Not Available | Negative | 4718989 - 4720377 | 48613.2 |
| 2-oxo acid dehydrogenase subunit e2 | EXZ48_22235 | Not Available | Negative | 4720382 - 4721719 | 47188.6 |
| alpha-ketoacid dehydrogenase subunit beta | EXZ48_22240 | Not Available | Negative | 4721723 - 4722736 | 36644.9 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | EXZ48_22245 | Not Available | Negative | 4722738 - 4723970 | 45013.8 |
| acyl-coa dehydrogenase | EXZ48_22250 | Not Available | Negative | 4724004 - 4725131 | 40519.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
