Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | EXZ48_22155 | Not Available | Positive | 4702443 - 4703141 | 25389.5 |
| divalent metal cation transporter | EXZ48_22160 | Not Available | Positive | 4703234 - 4704559 | 47058.9 |
| tetratricopeptide repeat protein | EXZ48_22165 | Not Available | Negative | 4704590 - 4705897 | 48005.7 |
| duf2076 domain-containing protein | EXZ48_22170 | Not Available | Negative | 4706186 - 4706722 | 18501.7 |
| hypothetical protein | EXZ48_22175 | Not Available | Negative | 4706935 - 4708164 | 43846.1 |
| lysr family transcriptional regulator | EXZ48_22180 | Not Available | Negative | 4708309 - 4709187 | 31760.0 |
| sulfite exporter taue/safe family protein | EXZ48_22185 | Not Available | Positive | 4709286 - 4710026 | 25264.1 |
| cytosine deaminase | EXZ48_22190 | Not Available | Negative | 4710039 - 4711331 | 46861.9 |
| abc transporter permease | EXZ48_22195 | Not Available | Negative | 4711328 - 4712269 | 33266.6 |
| abc transporter permease | EXZ48_22200 | Not Available | Negative | 4712272 - 4713321 | 36377.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
