Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2218 domain-containing protein | EXZ48_22050 | Not Available | Positive | 4683307 - 4683588 | 10456.4 |
| marr family transcriptional regulator | EXZ48_22055 | Not Available | Negative | 4683605 - 4684123 | 19003.8 |
| mfs transporter | EXZ48_22060 | Not Available | Positive | 4684256 - 4685788 | 53184.4 |
| duf808 domain-containing protein | EXZ48_22065 | Not Available | Positive | 4685950 - 4686948 | 33999.2 |
| duf2200 domain-containing protein | EXZ48_22070 | Not Available | Positive | 4687009 - 4687359 | 13039.7 |
| tetr family transcriptional regulator | EXZ48_22075 | Not Available | Negative | 4687373 - 4688071 | 25706.0 |
| rida family protein | EXZ48_22080 | Not Available | Positive | 4688238 - 4688726 | 16887.6 |
| thioredoxin | EXZ48_22085 | Not Available | Positive | 4688918 - 4689154 | 8194.76 |
| phosphatidylserine decarboxylase | EXZ48_22095 | Not Available | Negative | 4689957 - 4690655 | 25464.3 |
| plp-dependent aminotransferase family protein | EXZ48_22100 | Not Available | Negative | 4690901 - 4692343 | 52124.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
